BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B01LP1|AL426462
(361 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1693 715 0.0
>3x_Contig1693
Length = 15531
Score = 715 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus
Query: 1 ttcaacaagttaaagcacacctttaatatgggaaataatgcctgacctgaccttttttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13344 ttcaacaagttaaagcacacctttaatatgggaaataatgcctgacctgaccttttttct 13403
Query: 61 atcagcactgtatttctgtttctgcttatgatcgatgaaaaagaaaaaaaaacctggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13404 atcagcactgtatttctgtttctgcttatgatcgatgaaaaagaaaaaaaaacctggaat 13463
Query: 121 gaaaccaagttgaaaaaagcgtgctaatcttttcaatatagcagccaggtgatgtaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13464 gaaaccaagttgaaaaaagcgtgctaatcttttcaatatagcagccaggtgatgtaggaa 13523
Query: 181 gcagtagcaatagtagtagcagttgaatctcaagttgaataacaatacctgcgtgtgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13524 gcagtagcaatagtagtagcagttgaatctcaagttgaataacaatacctgcgtgtgaga 13583
Query: 241 ggaagaactatgtaaagtagatagttctaatccaaaaaaaaaagggaacaaatcatacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13584 ggaagaactatgtaaagtagatagttctaatccaaaaaaaaaagggaacaaatcatacgt 13643
Query: 301 agaagaagtaaataaacaaacaaggaaggaacatatagcgttttagttatatatagcgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13644 agaagaagtaaataaacaaacaaggaaggaacatatagcgttttagttatatatagcgtc 13703
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5630
Number of Sequences: 1807
Number of extensions: 5630
Number of successful extensions: 216
Number of sequences better than 1.0e-20: 1
length of query: 361
length of database: 10,358,551
effective HSP length: 16
effective length of query: 345
effective length of database: 10,329,639
effective search space: 3563725455
effective search space used: 3563725455
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)